Message boards : Number crunching : Problems with Rosetta version 5.98
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| Author | Message | 
|---|---|
| AMD_is_logical Send message Joined: 20 Dec 05 Posts: 299 Credit: 31,460,681 RAC: 0 | 
 I just watched this HR19__BOINC_LONGNOE_JUMPRELAX_BARCODE_SAVE_ALL_OUT_200-HR19_-_4539_39952_0 one die on me. 1:48 computation time and then it even pops up a windows error box. I had a HR19__BOINC_LONGNOE_JUMPRELAX_BARCODE_SAVE_ALL_OUT_200-HR19_-_4539 die on one of my Linux nodes: https://boinc.bakerlab.org/rosetta/result.php?resultid=195898771 | 
| Qui-Gon Jinn Send message Joined: 10 Aug 08 Posts: 3 Credit: 4,683 RAC: 0 | 
 Wierd, i had the same problem with a similar task. This is what Boinc said. 10/2/2008 7:15:37 PM|rosetta@home|Starting HR19__BOINC_LONGNOE_JUMPRELAX_BARCODE_SAVE_ALL_OUT_200-HR19_-_4539_162905_0 10/2/2008 7:15:40 PM|rosetta@home|Starting task HR19__BOINC_LONGNOE_JUMPRELAX_BARCODE_SAVE_ALL_OUT_200-HR19_-_4539_162905_0 using rosetta_beta version 598 10/2/2008 7:15:41 PM|rosetta@home|Started upload of abinitio_nohomfrag_70_A_2he4A_4482_20855_0_0 10/2/2008 7:15:46 PM|rosetta@home|Finished upload of abinitio_nohomfrag_70_A_2he4A_4482_20855_0_0 10/2/2008 7:32:34 PM|rosetta@home|Computation for task HR19__BOINC_LONGNOE_JUMPRELAX_BARCODE_SAVE_ALL_OUT_200-HR19_-_4539_162905_0 finished 10/2/2008 7:32:34 PM|rosetta@home|Output file HR19__BOINC_LONGNOE_JUMPRELAX_BARCODE_SAVE_ALL_OUT_200-HR19_-_4539_162905_0_0 for task HR19__BOINC_LONGNOE_JUMPRELAX_BARCODE_SAVE_ALL_OUT_200-HR19_-_4539_162905_0 absent Note that the WU was running for only 1000 seconds. I run vista and it said that the process was malfunctioning ( and then stopped it). | 
| Fishead Send message Joined: 3 Sep 08 Posts: 7 Credit: 89,566 RAC: 0 | 
 Same problems here: https://boinc.bakerlab.org/rosetta/workunit.php?wuid=179380707 https://boinc.bakerlab.org/rosetta/workunit.php?wuid=177135943 One of them gave me a windows error as well, but I'm afraid I don't remember which it was. | 
| Griiim Dave Send message Joined: 4 Sep 08 Posts: 3 Credit: 386,218 RAC: 0 | 
 3 workunits starting with HR19 failed on me this morning! | 
|  Greg_BE  Send message Joined: 30 May 06 Posts: 5770 Credit: 6,139,760 RAC: 1 | 
 HR19__BOINC_LONGNOE_JUMPRELAX_BARCODE_SAVE_ALL_OUT_200-HR19_-_4539_122324_0  10/4/2008 10:32:44 AM|rosetta@home|Starting task HR19__BOINC_LONGNOE_JUMPRELAX_BARCODE_SAVE_ALL_OUT_200-HR19_-_4539_122324_0 using rosetta_beta version 598 10/4/2008 2:28:18 PM|rosetta@home|Computation for task HR19__BOINC_LONGNOE_JUMPRELAX_BARCODE_SAVE_ALL_OUT_200-HR19_-_4539_122324_0 finished 10/4/2008 2:28:18 PM|rosetta@home|Output file HR19__BOINC_LONGNOE_JUMPRELAX_BARCODE_SAVE_ALL_OUT_200-HR19_-_4539_122324_0_0 for task HR19__BOINC_LONGNOE_JUMPRELAX_BARCODE_SAVE_ALL_OUT_200-HR19_-_4539_122324_0 absent Exit status -1073741819 (0xc0000005) CPU time 13778.61 stderr out <core_client_version>6.2.19</core_client_version> < adrianxw  Send message Joined: 18 Sep 05 Posts: 662 Credit: 12,140,580 RAC: 0 | 
 HR19__BOINC_LONGNOE_JUMPRELAX_BARCODE_SAVE_ALL_OUT_200-HR19_-_4539_228065_1 <core_client_version>5.10.45</core_client_version> <  | 
 Task ID 194793599 gave a Compute Error with the std err: Thanks Speedy. Finger trouble here... I've noticed Mgr 6.2.19 is out now - updating now in the vain hope it helps my issue here or with mini 1.34 errors. This post really just a marker. Any improvement and I'll revert to 3 hour runs instead of 2 hour to help save on bandwidth.     | 
| Matthias Lehmkuhl Send message Joined: 20 Nov 05 Posts: 13 Credit: 2,685,725 RAC: 87 | 
 I got this error on a machine, causes a window with user acknowledge, where the CPU runs no other boinc project since I press OK. resultid=197473964 Exit status -1073741819 (0xc0000005) <core_client_version>6.2.19</core_client_version> < Send message Joined: 15 Sep 06 Posts: 135 Credit: 23,893,657 RAC: 13 | 
 My last 2 tasks completed with a Computation Error and I was not granted credit. I am using V5.98. I am not having any problems with any other BOINC serviced applications. The thread to subscribe to for notifications of new Rosetta versions is supposed to be Rosetta Application Version Release Log. However, the Rosetta team apparently has trouble remembering this. | 
|  rochester  new york  Send message Joined: 2 Jul 06 Posts: 2842 Credit: 2,020,043 RAC: 0 | 
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| kctipton Send message Joined: 21 Nov 05 Posts: 2 Credit: 76,842 RAC: 0 | 
 https://boinc.bakerlab.org/rosetta/workunit.php?wuid=185399690 -- your server sent it out 3x and thereby created an error condition of "too many results" | 
| Toby Broom Send message Joined: 15 Oct 08 Posts: 11 Credit: 18,732,062 RAC: 0 | 
 I have a computer running Windows Server 2008 Core. This edition of windows doesn't include opengl.dll, this is causing failed workunits on my computer. As I run BOINC as a service I assumed that the opengl.dll was only used for the screensaver and hence wouldn't be needed. | 
| Aegis Maelstrom Send message Joined: 29 Oct 08 Posts: 61 Credit: 2,137,555 RAC: 0 | 
 Hi, I seem to have a following problem with the client: a unit resumes just to get completed after a couple of seconds and get uploaded as succesful. Unfortunately, I had a similar problem with a minirosetta (but then it was after 3 restarts and probably new memory requirements for the recent tasks - I say probably because nobody replied my directly). Message 57035 
 This time the process was resumed after 3 hrs of work. Log: 2008-11-24 00:49:04|rosetta@home|Restarting task LZ21__BOINC_SYMM_FOLD_AND_DOCK_RELAX-LZ21_-foldanddock__4643_15895_2 using rosetta_beta version 598 2008-11-24 00:49:25|rosetta@home|Computation for task LZ21__BOINC_SYMM_FOLD_AND_DOCK_RELAX-LZ21_-foldanddock__4643_15895_2 finished 2008-11-24 00:49:26|rosetta@home|Starting cs_jumping_abrelax_6PNAS_proteins3_homo_bench_cs_jumping_abrelax_cs_nsp1_olange_4732_32919_1 2008-11-24 00:49:31|rosetta@home|Starting task cs_jumping_abrelax_6PNAS_proteins3_homo_bench_cs_jumping_abrelax_cs_nsp1_olange_4732_32919_1 using minirosetta version 140 2008-11-24 00:49:32|rosetta@home|Started upload of LZ21__BOINC_SYMM_FOLD_AND_DOCK_RELAX-LZ21_-foldanddock__4643_15895_2_0 2008-11-24 00:49:37|rosetta@home|Finished upload of LZ21__BOINC_SYMM_FOLD_AND_DOCK_RELAX-LZ21_-foldanddock__4643_15895_2_0 Is there a problem with a client or a machine? Does BOINC require a reinstall, more resources or what exactly? EDIT: Unfortunately I can't tell how many % was completed before the resuming. If it was more than 90% it could have been just a coincidence. :/ | 
| PlaNed Send message Joined: 25 Sep 05 Posts: 3 Credit: 37,334 RAC: 0 | 
 Today NOD32 report: 01.12.2008 09:49:22 HTTP filter file http://srv1.bakerlab.org/rosetta/download/rosetta_beta_5.98_windows_intelx86.exe probably a variant of Win32/Statik application connection terminated - quarantined <img src="http://boinc.mundayweb.com/one/stats.php?userID=120&trans=off"> | 
|  ByRad  Send message Joined: 12 Apr 08 Posts: 8 Credit: 15,904,173 RAC: 0 | 
 This message window occured:    Log messages: 2008-12-08 21:22:52|rosetta@home|Starting t062_1_NMRREF_1_t062_1_id_model_04_coreIGNORE_THE_REST_idl_5434_6154_0 2008-12-08 21:22:53|rosetta@home|Starting task t062_1_NMRREF_1_t062_1_id_model_04_coreIGNORE_THE_REST_idl_5434_6154_0 using rosetta_beta version 598 2008-12-08 22:48:05|rosetta@home|Computation for task t062_1_NMRREF_1_t062_1_id_model_04_coreIGNORE_THE_REST_idl_5434_6154_0 finished 2008-12-08 22:48:05|rosetta@home|Output file t062_1_NMRREF_1_t062_1_id_model_04_coreIGNORE_THE_REST_idl_5434_6154_0_0 for task t062_1_NMRREF_1_t062_1_id_model_04_coreIGNORE_THE_REST_idl_5434_6154_0 absent   | 
|  robertmiles Send message Joined: 16 Jun 08 Posts: 1251 Credit: 14,421,737 RAC: 0 | 
 Hi, I seem to have a following problem with the client: a unit resumes just to get completed after a couple of seconds and get uploaded as succesful. I'm not sure what went wrong, but my machine has acted better after I increased the upper limit on how much disk space BOINC is allowed to use and also increased the fraction of the virtual memory BOINC is allowed to use. I'd consider increasing the amount of physical memory it has as well, except that I'm already at the limit of how much my motherboard can handle. As far as I can tell, the check of whether to end processing of a workunit comes only at the beginning of a timeslice. Restarting a task also starts a new timeslice, so the check of whether to return only the results calculated so far comes soon afterwards. Minirosetta seems to have problems showing the correct time remaining between the time it reaches about 10 minutes from the initial estimated time it needs until it's complete, so if you get a workunit with a bad estimate of how much time it needs, expect slowly changing estimates of how much CPU time it needs to complete during this time. I wouldn't be surprized if Rosetta 5.98 has the same problem. | 
| frederick corse Send message Joined: 7 Oct 05 Posts: 10 Credit: 1,545,999 RAC: 0 | 
 Hello  there seems to be a problem with AT01 they all fail during download can't get input files. I've had them download to my G5 and also to my mac pro with the same error. | 
| Evan Send message Joined: 23 Dec 05 Posts: 268 Credit: 402,585 RAC: 0 | 
 error with these two -  no heartbeat problems 227327788 (second time) lasted .42 secs </stderr_txt> <message> <file_xfer_error> <file_name>t078_1_NMRREF_1_t078_1_idS_vnl_00024494_10961IGNORE_THE_REST_431_6701_745_1_0</file_name> <error_code>-161</error_code> </file_xfer_error> and with 227327677 (first time) lasted .41 sec /stderr_txt> <message> <file_xfer_error> <file_name>t078_1_NMRREF_1_t078_1_idS_vnl_00024494_10961IGNORE_THE_REST_431_6701_1032_0_0</file_name> <error_code>-161</error_code> </file_xfer_error> and this one had a validate error 227327697 | 
            Message boards : 
            Number crunching : 
        Problems with Rosetta version 5.98
    
 
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